STRINGSTRING
ECs3687 ECs3687 ECs4739 ECs4739 ECs1462 ECs1462 ECs3686 ECs3686 ECs4713 ECs4713 ECs5142 ECs5142 ECs5148 ECs5148 ECs5155 ECs5155 ECs4919 ECs4919 ECs0054 ECs0054 ECs4119 ECs4119
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3687Putative invasion protein; Similar to YGDP_ECOLI gi|1789194 percent identity 99 in 176 aa (Conserved in E.coli K-12). (176 aa)    
Predicted Functional Partners:
ECs4739
Diaminopimelate epimerase; Similar to DAPF_ECOLI gi|1790242 percent identity 100 in 275 aa (Conserved in E.coli K-12).
 
 
 
 0.935
ECs1462
Similar to RNE_ECOLI gi|1787325 percent identity 98 in 1061 aa (Conserved in E.coli K-12).
     
 0.828
ECs3686
PTS system transcriptional regulator enzyme I; Similar to PTSP_ECOLI gi|1789193 percent identity 99 in 748 aa (Conserved in E.coli K-12).
  
    0.798
ECs4713
Putative ATP-dependent RNA helicase; Similar to RHLB_ECOLI gi|1790214 percent identity 99 in 421 aa (Conserved in E.coli K-12).
  
 0.776
ECs5142
Hypothetical protein; Similar to YJEF_ECOLI gi|1790609 percent identity 99 in 515 aa (Conserved in E.coli K-12).
  
 0.769
ECs5148
Host factor I for bacteriophage Q beta replication; Similar to HFQ_ECOLI gi|1790614 percent identity 100 in 102 aa (Conserved in E.coli K-12).
  
  
 0.730
ECs5155
Putative enzyme; Similar to VACB_ECOLI gi|1790622 percent identity 99 in 827 aa (Conserved in E.coli K-12).
   
 0.696
ECs4919
Hypothetical protein; Similar to YJAD_ECOLI gi|1790429 percent identity 98 in 257 aa (Conserved in E.coli K-12).
     
 0.633
ECs0054
Diadenosine tetraphosphatase; Similar to APAH_ECOLI gi|1786234 percent identity 98 in 279 aa (Conserved in E.coli K-12).
  
   
 0.621
ECs4119
Similar to RNG_ECOLI gi|140751|sp|P25537 percent identity 100 in 489 aa (Conserved in E.coli K-12).
     
 0.609
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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